Course Objective
Class Syllabus
Requirement
Exams
Class Policy
Research Paper
Bio 211A I Bio 340 I Bio 464 I Bio 468/568  
Bio 490 I

C.         LECTURE TIMES AND VENUE:

Lectures will be held in LA-5 Room 357 Tuesdays and Thursdays, 2.00 -3.15 a.m. You are responsible for all announcements, assignments, handouts, etc. even if you are late or absent from class.

There is no required textbook for this class.  However, information relevant to many of the lectures can be found in the following text books which are recommended as reading and for general reference.   

Recommended Texts:

Principles of Ecotoxicology, Third Edition (Paperback). ISBN:084933635X, ISBN 13:9780849336355.  Author(s): Walker, C.H., S. P. Hopkin  R. M. Sibly. Published by: Taylor & Francis.

Fundamentals of Aquatic Toxicology.  Effects, Environmental Fate and Risk Assessment. 2nd Ed. Ed G. Rand.  Taylor and Francis.  Philadelphia, London.  ISBN 1-56032-091-5

Quantitative Chemical Analysis.  2011.  8th Edition. Harris, D.C.  W.H. Freeman and Company, New York. ISBN-10 1-4292-1815-0.  ISBN-13 978-1-4292-1815-3.  QD101.2.H37

Exploring Chemical Analysis.  2008.  4th Edition.  Harris, D.C.  W.H. Freeman and Company, New York.  ISBN: 978-1-4292-1004-1.  QD75.2.H368

Aquatic Toxicology: Molecular, Biochemical, and Cellular Perspectives:   Donald C. Malins and Gary K. Ostrander. 1993, Lewis Publishers, Inc.; 520 pp., ISBN: 0-87371-545-4

Metal Speciation and Bioavailability in Aquatic Systems.  International Union of Pure and Applied Chemistry series (IUPAC).  Chapter 10  Metal Detoxification in Aquatic Organisms.  Pp 479-609.  J. Wiley Publishers. (Eds.  A. Tessier and D.R. Turner).

LECTURE OUTLINE:  A general lecture outline is given below describing some of the topics that will be discussed in lecture.  Depending upon the depth and breadth of the subject matter, various topics may cover more than an individual lecture period.  In addition, to demonstrate the analytical complexities of undertaking direct chemical analyses in an ecotoxicological study, the class will undertake a field trip to collect sediment and infaunal invertebrate samples for direct chemical analyses from Colorado Lagoon, a locally impacted lagoon which will be undergoing remediation and restoration in the near future.  Consequently, no attempt has been made to allocate dates to the various lectures given in the table below.
 

Lecture Topic
1 Outline of Course Syllabus & Introduction to Aquatic Toxicology. 
2 Major Classes of Pollutants (Inorganics, Organics, Radiation etc) 
3 Routes by Which Pollutants Enter the Aquatic Ecosystems.
4 Direct Chemical methods for the identification, quantification and speciation of  inorganic  pollutants 
5 Direct Chemical methods for the identification, quantification and speciation of  organic  pollutants
6 In Situ biomonitoring systems for water quality assessment
7 Determination of Toxicity: Toxicity Testing.  Trials and Tribulations
8 Toxicity Assessment: End points in Toxicity (Acute versus Chronic; Lethal vs physiological)
9 Behavioral responses to toxicants 
10 Physiological responses to toxicants
11 Biochemical responses to toxicants
12 Cellular and Molecular responses to toxicants
13 Biomarkers of Xenobiotic Stress (organismal, cell/tissue, subcellular)
14 Biomarkers of Xenobiotic Stress (Alarm parameters, Toxicity stress/strain parameters/ Finger print parameters)
15 Molecular Mechanisms of interaction of Inorganics (Metallothioneins)
16 Molecular Mechanisms of interaction of Organics (Cytochrome P-450)
17 Recombinant reporter assays for Toxicological Assessment
18 Case Studies in Toxicology (Cytochrome P-450 induction and Endocrine Disruption by TBT). 
19  
20-24 STUDENT PRESENTATIONS I - IV (see below)
25 FINAL EXAM: Thursday, May 19th, LA5-357 12.30 - 2.30 p.m.
 
 

Presentation Schedule

Barillas,Pablo Jose

iodine 131/125

March 3rd - 1

Fellerman,Raymond George

Lead,

March 3rd - 2

Ma,Te

Se

March 3rd - 3

Morfin, Hector

Cu

March 3rd - 4

Chow,Karen Wing Yi

Methoxychlor

March 3rd - 5

Yip,Michael K

nanoparticles

March 3rd - 6

Desgens Martin,Violaine

TBT and Cr

March 3rd - 7

 

 

 

Lyons,Katherine DH

PCB, benzo(a)pyrene

March 5th - 1

Watts,Ashley Christine

DDT

March 5th - 2

Chiu,Gabriel C

E2

March 5th - 3

Gagnon,Courtney Alexandria

Cd

March 5th - 4

Overlin,Lyndsey SueAnne

Ni

March 5th - 5

Young,Jessica Marie

Zn

March 5th - 6

Wickremasinghe Harshini

Hg

March 5th - 7

Stanton,Laura Allison

As

March 5th - 8

 

 

 

 

 

Friends of the Colorado Lagoon - Taylor Parker

Metal analyses by ICP-MS - Andrew Hamilton

Organics Analysis by GCMS - Mary Blasius

Certified Reference Material 1747

Enzyme Inhibition

Lecture 1

Lecture 2

Lecture 3

Lecture 4 - Cytochrome P- 450

Certified reference Material 1944 Sediment

Additional Information on Toxicology report

Basics of GC-MS - Mary Blasius Lecture

Phase2 enzymes

TBT-induced Imposex

Biomarkers

Endocrine Disruption